primekg-mcp

# PrimeKG to Neo4j This project imports the Precision Medicine Knowledge Graph (PrimeKG) into a Neo4j database for data analysis and exploration. ## Overview PrimeKG is a comprehensive biomedical knowledge graph that integrates 20 high-quality biomedical resources to describe 17,080 diseases with over 4 million relationships across ten major biological scales. This project: 1. Downloads and processes PrimeKG data 2. Imports the data into a Neo4j graph database 3. Provides tools for querying and analyzing the data ## Project Structure ``` primekg-mcp/ ├── config/ # Configuration files ├── data/ # Data files (PrimeKG data will be stored here) ├── docs/ # Documentation ├── scripts/ # Utility scripts for data processing ├── src/ # Source code │ ├── db/ # Database connection and queries │ ├── etl/ # Data extraction, transformation, loading │ └── utils/ # Utility functions └── tests/ # Test files ``` ## Setup Instructions (Setup instructions will be added as the project progresses) ## Usage (Usage instructions will be added as the project progresses) ## License (License information will be added)